RosBREEDSNP_SNP_CA_1447290_Lg9_01339_MAF40_154165_exon1, RosBREEDSNP_SNP_CA_1447290_Lg9_01339_MAF40_154165_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CA_1447290_Lg9_01339_MAF40_154165_exon1
dbSNP IDss475883555
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CA_1447290_Lg9_01339_MAF40_154165_exon1
50K SNP array for apple:AX-105197818
TypeSNP
SNP AllelesA/C
5' Flanking SequenceAATTAATTCTCTTATCAAAATCCCTAGGTTTTTCC
3' Flanking SequenceTGCAATGTGACATGATCCCTTTCTACGTTCTCTC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20135N/A66.1RosBREEDSNP_SNP_CA_1447290_Lg9_01339_MAF40_154165_exon1View
2Apple-M432-2013-physical-Malus-domestica9N/A1447290RosBREEDSNP_SNP_CA_1447290_Lg9_01339_MAF40_154165_exon1View
Sequence
>RosBREEDSNP_SNP_CA_1447290_Lg9_01339_MAF40_154165_exon1 ID=RosBREEDSNP_SNP_CA_1447290_Lg9_01339_MAF40_154165_exon1; Name=RosBREEDSNP_SNP_CA_1447290_Lg9_01339_MAF40_154165_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
AATTAATTCTCTTATCAAAATCCCTAGGTTTTTCCMTGCAATGTGACATG
ATCCCTTTCTACGTTCTCTC
Alignments
Feature NameTypeLocationAnalysis
MDC022718.183 contig MDC022718.183:4583..4583. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr05 chromosome Chr05:5211472..5211472. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr05 chromosome Chr05:5211470..5211470. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation