MdCCD7b, MdCCD7b (genetic_marker) Malus x domestica

Marker Overview

Name

MdCCD7b

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:	MdCCD7b
50K SNP array for apple:	AX-105174115

Type

SNP

SNP Alleles

A/G

5' Flanking Sequence

3' Flanking Sequence

TATTTGGGTGTGCATTCTATGTGCCAAGTTGCAC

Species

Publication

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip
50K SNP array for apple	SNP_chip

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2020	Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8

Sequence

>MdCCD7b ID=MdCCD7b; Name=MdCCD7b; organism=Malus x domestica; type=genetic_marker; length=36bp
ARTATTTGGGTGTGCATTCTATGTGCCAAGTTGCAC

Alignments

Feature Name	Type	Location	Analysis
MDC041054.5	contig	MDC041054.5:9177..9177.	Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr14	chromosome	Chr14:8869213..8869213.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr14	chromosome	Chr14:8869353..8869353.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation