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Marker Overview
| Name | RosBREEDSNP_SNP_CT_11763475_Lg5_RosCOS544_MAF10_1675698_exon1 |
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| dbSNP ID | ss475878289 |
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| SNP Array ID | | IRSC 9K SNP array for apple: | RosBREEDSNP_SNP_CT_11763475_Lg5_RosCOS544_MAF10_1675698_exon1 | | 50K SNP array for apple: | AX-105214577 |
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| Type | SNP |
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| SNP Alleles | T/C |
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| 5' Flanking Sequence | ACTTTATGCTATACATTGATGCATGGTAGAATGAC |
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| 3' Flanking Sequence | ATACTTACCACAGGTTGCATCCGGGCTTTACGAA |
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| Species | Malus x domestica |
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| Publication | [view all] |
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Analyses
This genetic_marker is derived from or has results from the following analyses
Publications
| Year | Publication |
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| 2013 | Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fernández FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407. |
| 2020 | Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8 |
Sequence
>RosBREEDSNP_SNP_CT_11763475_Lg5_RosCOS544_MAF10_1675698_exon1 ID=RosBREEDSNP_SNP_CT_11763475_Lg5_RosCOS544_MAF10_1675698_exon1; Name=RosBREEDSNP_SNP_CT_11763475_Lg5_RosCOS544_MAF10_1675698_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
ACTTTATGCTATACATTGATGCATGGTAGAATGACYATACTTACCACAGG
TTGCATCCGGGCTTTACGAA
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