RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2, RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2
Aliasss475879808
rs267612753
c475879808
SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2
AX-105223338
dbSNP IDss475879808
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2
50K SNP array for apple:RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2
TypeSNP
SNP AllelesA/C
5' Flanking SequenceTTTTCTTTCTTAAATGACCATCAATTTCAGTTGCA
3' Flanking SequenceAACTATCATGCCTTTTCTGCCCTACTCTACTATC
SpeciesMalus x domestica
PolymorphismP_ RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2 ID=RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2|Name=RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2|organism=Malus x domestica|type=genetic_marker|length=70bp
TTTTCTTTCTTAAATGACCATCAATTTCAGTTGCAMAACTATCATGCCTT
TTCTGCCCTACTCTACTATC
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201310N/A57.21RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2View
2Apple-M432-2013-physical-Malus-domestica10N/A20822717RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2View
Alignments
Feature NameTypeLocationAnalysis
MDC015606.185 contig MDC015606.185:13517..13517. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr10 chromosome Chr10:27266583..27266583. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr10 chromosome Chr10:27266582..27266582. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation