RosBREEDSNP_SNP_TG_33629578_Lg3_01014_MAF20_MDP0000270427_exon2, RosBREEDSNP_SNP_TG_33629578_Lg3_01014_MAF20_MDP0000270427_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TG_33629578_Lg3_01014_MAF20_MDP0000270427_exon2
Aliasss475877782
rs267610728
b475877782
SNP_TG_33629578_Lg3_01014_MAF20_MDP0000270427_exon2
AX-105214717
dbSNP IDss475877782
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TG_33629578_Lg3_01014_MAF20_MDP0000270427_exon2
50K SNP array for apple:RosBREEDSNP_SNP_TG_33629578_Lg3_01014_MAF20_MDP0000270427_exon2
TypeSNP
SNP AllelesT/G
5' Flanking SequenceTGATCTACCAAGGCTTTTTCATATAAGCTTGGGAA
3' Flanking SequenceAAACCTTATTTCAGGTGAATTTCCAAAAGAACTT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_TG_33629578_Lg3_01014_MAF20_MDP0000270427_exon2RosBREEDSNP_SNP_TG_33629578_Lg3_01014_MAF20_MDP0000270427_exon2Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_TG_33629578_Lg3_01014_MAF20_MDP0000270427_exon2 ID=RosBREEDSNP_SNP_TG_33629578_Lg3_01014_MAF20_MDP0000270427_exon2|Name=RosBREEDSNP_SNP_TG_33629578_Lg3_01014_MAF20_MDP0000270427_exon2|organism=Malus x domestica|type=genetic_marker|length=70bp
TGATCTACCAAGGCTTTTTCATATAAGCTTGGGAAKAAACCTTATTTCAG
GTGAATTTCCAAAAGAACTT
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20133N/A55.7RosBREEDSNP_SNP_TG_33629578_Lg3_01014_MAF20_MDP0000270427_exon2View
2Apple-M432-2013-physical-Malus-domestica3N/A33629578RosBREEDSNP_SNP_TG_33629578_Lg3_01014_MAF20_MDP0000270427_exon2View
Alignments
Feature NameTypeLocationAnalysis
MDC000229.273 contig MDC000229.273:4920..4920. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr03 chromosome Chr03:32587879..32587879. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr03 chromosome Chr03:32587878..32587878. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation