RosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3, RosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3
Aliasss475879741
rs267612687
c475879741
SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3
AX-105198528
dbSNP IDss475879741
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3
50K SNP array for apple:RosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3
TypeSNP
SNP AllelesT/C
5' Flanking SequenceAAAGTCGGAATATGTTACCTCAATAAGCCAGTTCA
3' Flanking SequenceGAAATTGCCCTCATTTCTGATGTCAAAAACTGCA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3RosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3 ID=RosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3|Name=RosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3|organism=Malus x domestica|type=genetic_marker|length=70bp
AAAGTCGGAATATGTTACCTCAATAAGCCAGTTCAYGAAATTGCCCTCAT
TTCTGATGTCAAAAACTGCA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201310N/A43.61RosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3View
2Apple-M432-2013-physical-Malus-domestica10N/A14692206RosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3View
Alignments
Feature NameTypeLocationAnalysis
MDC013858.257 contig MDC013858.257:2758..2758. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr10 chromosome Chr10:22397213..22397213. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr10 chromosome Chr10:22397212..22397212. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation