RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1, RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1
Aliasss475877770
rs267610716
a475877770
SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1
AX-105188034
dbSNP IDss475877770
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1
50K SNP array for apple:RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1
TypeSNP
SNP AllelesA/C
5' Flanking SequenceATCAGCTCTGCTCTCCTTTGTGGGTCGATCCCCGC
3' Flanking SequenceACCCCATTGATCAACTTATCAGCCGAAACGTCCA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1Malus x domesticamarker_locus
RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1-134.09Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1 ID=RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1|Name=RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
ATCAGCTCTGCTCTCCTTTGTGGGTCGATCCCCGCMACCCCATTGATCAA
CTTATCAGCCGAAACGTCCA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20133N/A52.8RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1View
2Apple-M432-2013-physical-Malus-domestica3N/A32704005RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1View
3Pear-PH-CG-2017LG12N/A134.09RosBREEDSNP_SNP_AC_32704005_Lg3_01329_MAF50_369648_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC016275.388 contig MDC016275.388:4252..4252. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr03 chromosome Chr03:32045201..32045201. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr03 chromosome Chr03:32045200..32045200. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation