RosBREEDSNP_SNP_TC_11303456_Lg8_RosCOS936_MAF50_MDP0000280399_exon1, RosBREEDSNP_SNP_TC_11303456_Lg8_RosCOS936_MAF50_MDP0000280399_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_11303456_Lg8_RosCOS936_MAF50_MDP0000280399_exon1
dbSNP IDss475879050
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_11303456_Lg8_RosCOS936_MAF50_MDP0000280399_exon1
50K SNP array for apple:AX-105201445
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTCGATTCCAGCAGAGATCGGGCTTCTAAACAAACT
3' Flanking SequenceGTGAACCTCAGCCTCGCCAAATACAACCTCTCGG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20135N/A44.2RosBREEDSNP_SNP_TC_11303456_Lg8_RosCOS936_MAF50_MDP0000280399_exon1View
2Apple-M432-2013-physical-Malus-domestica8N/A11303456RosBREEDSNP_SNP_TC_11303456_Lg8_RosCOS936_MAF50_MDP0000280399_exon1View
3Apple-RosBREED-3.9K-20195N/A31.68RosBREEDSNP_SNP_TC_11303456_Lg8_RosCOS936_MAF50_MDP0000280399_exon1View
Sequence
>RosBREEDSNP_SNP_TC_11303456_Lg8_RosCOS936_MAF50_MDP0000280399_exon1 ID=RosBREEDSNP_SNP_TC_11303456_Lg8_RosCOS936_MAF50_MDP0000280399_exon1; Name=RosBREEDSNP_SNP_TC_11303456_Lg8_RosCOS936_MAF50_MDP0000280399_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
TCGATTCCAGCAGAGATCGGGCTTCTAAACAAACTYGTGAACCTCAGCCT
CGCCAAATACAACCTCTCGG
Alignments
Feature NameTypeLocationAnalysis
MDC008397.632 contig MDC008397.632:6726..6726. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr05 chromosome Chr05:26953969..26953969. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr05 chromosome Chr05:26953967..26953967. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation