RosBREEDSNP_SNP_CT_24445080_Lg5_AT11_MAF30_1661846_exon2, RosBREEDSNP_SNP_CT_24445080_Lg5_AT11_MAF30_1661846_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_24445080_Lg5_AT11_MAF30_1661846_exon2
dbSNP IDss475883721
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_24445080_Lg5_AT11_MAF30_1661846_exon2
50K SNP array for apple:AX-105178789
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTGTGCTTGGATCCATGTCAATATTAGATGCATGCA
3' Flanking SequenceATAAATATCGAAGTCTATAATAATACGAAACAAA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20135N/A69RosBREEDSNP_SNP_CT_24445080_Lg5_AT11_MAF30_1661846_exon2View
2Apple-M432-2013-physical-Malus-domestica5N/A24445080RosBREEDSNP_SNP_CT_24445080_Lg5_AT11_MAF30_1661846_exon2View
Sequence
>RosBREEDSNP_SNP_CT_24445080_Lg5_AT11_MAF30_1661846_exon2 ID=RosBREEDSNP_SNP_CT_24445080_Lg5_AT11_MAF30_1661846_exon2; Name=RosBREEDSNP_SNP_CT_24445080_Lg5_AT11_MAF30_1661846_exon2; organism=Malus x domestica; type=genetic_marker; length=70bp
TGTGCTTGGATCCATGTCAATATTAGATGCATGCAYATAAATATCGAAGT
CTATAATAATACGAAACAAA
Alignments
Feature NameTypeLocationAnalysis
MDC020989.438 contig MDC020989.438:113..113. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr05 chromosome Chr05:21708561..21708561. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr11 chromosome Chr11:670617..670617. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr14 chromosome Chr14:3612987..3612987. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr15 chromosome Chr15:7723511..7723511. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation