RosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2, RosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2
Aliasss475877771
rs267610717
a475877771
SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2
AX-105184577
dbSNP IDss475877771
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2
50K SNP array for apple:RosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2
TypeSNP
SNP AllelesA/G
5' Flanking SequenceATTGAAGCAATCCAGACCAAGGATCCCGTCTTCAC
3' Flanking SequenceGTGTTTGAGCATCGCCGACCCGTGAGTCCTGACA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2RosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2Malus x domesticamarker_locus
RosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2RosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2-16.862Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2 ID=RosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2|Name=RosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2|organism=Malus x domestica|type=genetic_marker|length=70bp
ATTGAAGCAATCCAGACCAAGGATCCCGTCTTCACRGTGTTTGAGCATCG
CCGACCCGTGAGTCCTGACA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-2013-physical-Malus-domestica3N/A32713288RosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2View
2Apple-Honeycrisp_Consensus-F11N/A16.86RosBREEDSNP_SNP_AG_32713288_Lg3_01329_MAF30_220555_exon2View
Alignments
Feature NameTypeLocationAnalysis
MDC008795.337 contig MDC008795.337:11491..11491. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr01 chromosome Chr01:19691191..19691191. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr01 chromosome Chr01:19691190..19691190. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation