RosBREEDSNP_SNP_TC_39154409_Lg11_00646_MAF40_1638302_exon18, RosBREEDSNP_SNP_TC_39154409_Lg11_00646_MAF40_1638302_exon18 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_39154409_Lg11_00646_MAF40_1638302_exon18
dbSNP IDss475880330
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_39154409_Lg11_00646_MAF40_1638302_exon18
50K SNP array for apple:AX-105223054
TypeSNP
SNP AllelesT/C
5' Flanking SequenceAGTGTGTCATCGGAGTCGACAAATATGAGTGAGCT
3' Flanking SequenceCTCCAATGGAATGACCTATACGGCGAAGGTGGATC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201311N/A81.3RosBREEDSNP_SNP_TC_39154409_Lg11_00646_MAF40_1638302_exon18View
2Apple-M432-2013-physical-Malus-domestica11N/A39154409RosBREEDSNP_SNP_TC_39154409_Lg11_00646_MAF40_1638302_exon18View
Sequence
>RosBREEDSNP_SNP_TC_39154409_Lg11_00646_MAF40_1638302_exon18 ID=RosBREEDSNP_SNP_TC_39154409_Lg11_00646_MAF40_1638302_exon18; Name=RosBREEDSNP_SNP_TC_39154409_Lg11_00646_MAF40_1638302_exon18; organism=Malus x domestica; type=genetic_marker; length=71bp
AGTGTGTCATCGGAGTCGACAAATATGAGTGAGCTYCTCCAATGGAATGA
CCTATACGGCGAAGGTGGATC
Alignments
Feature NameTypeLocationAnalysis
MDC013467.418 contig MDC013467.418:43085..43085. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr11 chromosome Chr11:42003428..42003428. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation