RosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1, RosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1
Aliasss475883035
rs267615975
b475883035
SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1
AX-105215255
dbSNP IDss475883035
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1
50K SNP array for apple:RosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1
TypeSNP
SNP AllelesT/G
5' Flanking SequenceCACCGCCATGAAAACACGAAAGTTGCAGGTGCAGC
3' Flanking SequenceTGACAGGGATCTCCGGCAGCCGATCTTTGATACG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1RosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1 ID=RosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1|Name=RosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
CACCGCCATGAAAACACGAAAGTTGCAGGTGCAGCKTGACAGGGATCTCC
GGCAGCCGATCTTTGATACG
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20133N/A37.6RosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1View
2Apple-M432-2013-physical-Malus-domestica10N/A36565723RosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC022469.188 contig MDC022469.188:5970..5970. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr03 chromosome Chr03:17388750..17388750. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr03 chromosome Chr03:17388748..17388748. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation