RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1, RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1
Aliasss475877012
rs267609959
c475877012
SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1
AX-105224325
dbSNP IDss475877012
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1
50K SNP array for apple:RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTTAGTTGCATTGCCCTCTTTCATGACATGTTTGAT
3' Flanking SequenceTAAGGCCCGACAATGAGAGCCCTATGCGTCCTGT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1 ID=RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1|Name=RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
TTAGTTGCATTGCCCTCTTTCATGACATGTTTGATRTAAGGCCCGACAAT
GAGAGCCCTATGCGTCCTGT
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20132N/A11.06RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1View
2Apple-M432-2013-physical-Malus-domestica2N/A3257068RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC005207.580 contig MDC005207.580:1399..1399. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr02 chromosome Chr02:2608388..2608388. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr02 chromosome Chr02:2608387..2608387. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation