RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1, RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1
dbSNP IDss475877012
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1
50K SNP array for apple:AX-105224325
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTTAGTTGCATTGCCCTCTTTCATGACATGTTTGAT
3' Flanking SequenceTAAGGCCCGACAATGAGAGCCCTATGCGTCCTGT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20132N/A11.06RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1View
2Apple-M432-2013-physical-Malus-domestica2N/A3257068RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1View
Sequence
>RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1 ID=RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1; Name=RosBREEDSNP_SNP_AG_3257068_Lg2_RosCOS1998_MAF20_110688_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
TTAGTTGCATTGCCCTCTTTCATGACATGTTTGATRTAAGGCCCGACAAT
GAGAGCCCTATGCGTCCTGT
Alignments
Feature NameTypeLocationAnalysis
MDC005207.580 contig MDC005207.580:1399..1399. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr02 chromosome Chr02:2608387..2608387. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation