RosBREEDSNP_SNP_AG_22015716_Lg4_MDP0000157871__MDP0000157871_exon1, RosBREEDSNP_SNP_AG_22015716_Lg4_MDP0000157871__MDP0000157871_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_22015716_Lg4_MDP0000157871__MDP0000157871_exon1
dbSNP IDss475875934
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_22015716_Lg4_MDP0000157871__MDP0000157871_exon1
50K SNP array for apple:AX-105216180
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTTAAGGGAAATCTCACTAAAGAGACTACCCTTTTC
3' Flanking SequenceAGCAATTCTTCAACTTCTCTAATTTTTTCATCAA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20135N/A13.3RosBREEDSNP_SNP_AG_22015716_Lg4_MDP0000157871__MDP0000157871_exon1View
2Apple-M432-2013-physical-Malus-domestica4N/A22015716RosBREEDSNP_SNP_AG_22015716_Lg4_MDP0000157871__MDP0000157871_exon1View
3Apple-Honeycrisp_Consensus-F111N/A51.11RosBREEDSNP_SNP_AG_22015716_Lg4_MDP0000157871__MDP0000157871_exon1View
Sequence
>RosBREEDSNP_SNP_AG_22015716_Lg4_MDP0000157871__MDP0000157871_exon1 ID=RosBREEDSNP_SNP_AG_22015716_Lg4_MDP0000157871__MDP0000157871_exon1; Name=RosBREEDSNP_SNP_AG_22015716_Lg4_MDP0000157871__MDP0000157871_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
TTAAGGGAAATCTCACTAAAGAGACTACCCTTTTCRAGCAATTCTTCAAC
TTCTCTAATTTTTTCATCAA
Alignments
Feature NameTypeLocationAnalysis
MDC000505.337 contig MDC000505.337:1972..1972. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr11 chromosome Chr11:34581876..34581876. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr11 chromosome Chr11:34581874..34581874. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation