RosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1, RosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1
Aliasss475879452
rs267612398
c475879452
SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1
AX-105178111
dbSNP IDss475879452
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1
50K SNP array for apple:RosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTACTTTTCTTCATTACTGTTGACATGGTATCTTCG
3' Flanking SequenceCGGCAAAGGGTAACACCGTCGTCGGTTCCTGATC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1RosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1 ID=RosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1|Name=RosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
TACTTTTCTTCATTACTGTTGACATGGTATCTTCGYCGGCAAAGGGTAAC
ACCGTCGTCGGTTCCTGATC
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201311N/A10.9RosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1View
2Apple-M432-2013-physical-Malus-domestica9N/A16990033RosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC003774.549 contig MDC003774.549:14428..14428. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr02 chromosome Chr02:33832933..33832933. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation