RosBREEDSNP_SNP_GT_19512819_Lg7_00871_MAF40_MDP0000625341_exon2, RosBREEDSNP_SNP_GT_19512819_Lg7_00871_MAF40_MDP0000625341_exon2 (genetic_marker) Malus x domestica

Marker Overview

Name

RosBREEDSNP_SNP_GT_19512819_Lg7_00871_MAF40_MDP0000625341_exon2

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:	RosBREEDSNP_SNP_GT_19512819_Lg7_00871_MAF40_MDP0000625341_exon2
50K SNP array for apple:	AX-105174827

Type

SNP

SNP Alleles

T/G

5' Flanking Sequence

TCAAAACCTGGAGGTTGCACCATATAGACTTCATC

3' Flanking Sequence

TGCAAAATGCCATGTAAAAAGGCATTTTTGACAT

Species

Malus x domestica

Publication

[view all]

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip
50K SNP array for apple	SNP_chip

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2020	Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8

Sequence

>RosBREEDSNP_SNP_GT_19512819_Lg7_00871_MAF40_MDP0000625341_exon2 ID=RosBREEDSNP_SNP_GT_19512819_Lg7_00871_MAF40_MDP0000625341_exon2; Name=RosBREEDSNP_SNP_GT_19512819_Lg7_00871_MAF40_MDP0000625341_exon2; organism=Malus x domestica; type=genetic_marker; length=70bp
TCAAAACCTGGAGGTTGCACCATATAGACTTCATCKTGCAAAATGCCATG
TAAAAAGGCATTTTTGACAT

Alignments

Feature Name	Type	Location	Analysis
MDC013973.552	contig	MDC013973.552:8013..8013.	Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr07	chromosome	Chr07:21371556..21371556.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation