RosBREEDSNP_SNP_TG_50064602_Lg15_01778_MAF40_MDP0000266480_exon3, RosBREEDSNP_SNP_TG_50064602_Lg15_01778_MAF40_MDP0000266480_exon3 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TG_50064602_Lg15_01778_MAF40_MDP0000266480_exon3
dbSNP IDss475881652
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TG_50064602_Lg15_01778_MAF40_MDP0000266480_exon3
50K SNP array for apple:AX-105177223
TypeSNP
SNP AllelesT/G
5' Flanking SequenceTTGAAAGAACCGTCAGAACCAGCGGTAGCAAATGT
3' Flanking SequenceTGATGTACCTGAAACGAGGAGCACAAATTAAGCT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201315N/A114.52RosBREEDSNP_SNP_TG_50064602_Lg15_01778_MAF40_MDP0000266480_exon3View
2Apple-M432-2013-physical-Malus-domestica15N/A50064602RosBREEDSNP_SNP_TG_50064602_Lg15_01778_MAF40_MDP0000266480_exon3View
Sequence
>RosBREEDSNP_SNP_TG_50064602_Lg15_01778_MAF40_MDP0000266480_exon3 ID=RosBREEDSNP_SNP_TG_50064602_Lg15_01778_MAF40_MDP0000266480_exon3; Name=RosBREEDSNP_SNP_TG_50064602_Lg15_01778_MAF40_MDP0000266480_exon3; organism=Malus x domestica; type=genetic_marker; length=70bp
TTGAAAGAACCGTCAGAACCAGCGGTAGCAAATGTKTGATGTACCTGAAA
CGAGGAGCACAAATTAAGCT
Alignments
Feature NameTypeLocationAnalysis
MDC018087.203 contig MDC018087.203:2505..2505. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr15 chromosome Chr15:51182880..51182880. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr15 chromosome Chr15:51217709..51217709. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr15 chromosome Chr15:51217707..51217707. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation