RosBREEDSNP_SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1, RosBREEDSNP_SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1
dbSNP IDss475879374
SNP Array ID
480K SNP array for apple:AX-105223287
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1
20K SNP array for apple:RosBREEDSNP_SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1
50K SNP array for apple:AX-105223287
TypeSNP
SNP AllelesT/C
Probe 1RosBREEDSNP_SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1.probe: TGCTCTATTGTCTGGTCCAGATCCGTGAGCTGTTTGGGAGGGAACCCCAT
5' Flanking SequenceATATACCGGCCTGCTCTATTGTCTGGTCCAGATCCGTGAGCTGTTTGGGAGGGAACCCCA T
3' Flanking SequenceGTCTGCAGTCGGTAACTTCTTGCCCCATCGGGCCTTGAGGCATCGATAAAAGCATGGATG T
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple_HCGA_F19N/A26.36SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1View
2Apple_HC64_F19N/A19.3SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1View
3Apple_HCMO_F19N/A17.9SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1View
4Apple_HGMM_Consenus9N/A27.74SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1View
5Apple-RosBREED-3.9K-20199N/A16.84SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1View
6Apple-BB-F19N/A22.23SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1View
7Apple-NC-F19N/A27.42SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1View
8Apple-NCZFBB-consensus9N/A24.46SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1View
9Apple-ZF-F19N/A28.15SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1View
10Apple-MM-F19N/A25.5c475879374View
11Apple-Honeycrisp_Consensus-F19N/A16.84RosBREEDSNP_SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1View
Sequence
>RosBREEDSNP_SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1 ID=RosBREEDSNP_SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1; Name=RosBREEDSNP_SNP_CT_7662205_Lg9_00893_MAF10_728787_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
TCCAGATCCGTGAGCTGTTTGGGAGGGAACCCCAT[C/T]GTCTGCAGTC
GGTAACTTCTTGCCCCATCGGGCCT