RosBREEDSNP_SNP_CT_17863496_Lg10_02252_MAF40_349404_exon1, RosBREEDSNP_SNP_CT_17863496_Lg10_02252_MAF40_349404_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_17863496_Lg10_02252_MAF40_349404_exon1
dbSNP IDss475879774
SNP Array ID
480K SNP array for apple:AX-115184375
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_17863496_Lg10_02252_MAF40_349404_exon1
20K SNP array for apple:RosBREEDSNP_SNP_CT_17863496_Lg10_02252_MAF40_349404_exon1
50K SNP array for apple:AX-105174595
TypeSNP
SNP AllelesA/G
Probe 1RosBREEDSNP_SNP_CT_17863496_Lg10_02252_MAF40_349404_exon1.probe: AGATTATTTCATCGAGCGGCCGAGATTTCCTGCTCATGAATTTCGGAGCC
5' Flanking SequenceGTGGTCATGATTGACAACTGCATTCAAGATGCTTTCAAAAAGCTCTCTTCTCATCCAAAA C
3' Flanking SequenceGGCTCCGAAATTCATGAGCAGGAAATCTCGGCCGCTCGATGAAATAATCTTTCATCATTT G
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-MM-F110N/A38.3a475879774View
Sequence
>RosBREEDSNP_SNP_CT_17863496_Lg10_02252_MAF40_349404_exon1 ID=RosBREEDSNP_SNP_CT_17863496_Lg10_02252_MAF40_349404_exon1; Name=RosBREEDSNP_SNP_CT_17863496_Lg10_02252_MAF40_349404_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
AGATGCTTTCAAAAAGCTCTCTTCTCATCCAAAAC[C/T]GGCTCCGAAA
TTCATGAGCAGGAAATCTCGGCCGC
Alignments
Feature NameTypeLocationAnalysis
MDC015316.131 contig MDC015316.131:37801..37801. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr10 chromosome Chr10:24448707..24448707. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation