RosBREEDSNP_SNP_AG_12453621_Lg14_02638_MAF40_MDP0000311542_exon1, RosBREEDSNP_SNP_AG_12453621_Lg14_02638_MAF40_MDP0000311542_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_12453621_Lg14_02638_MAF40_MDP0000311542_exon1
dbSNP IDss475881053
SNP Array ID
480K SNP array for apple:AX-105208927
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_12453621_Lg14_02638_MAF40_MDP0000311542_exon1
20K SNP array for apple:RosBREEDSNP_SNP_AG_12453621_Lg14_02638_MAF40_MDP0000311542_exon1
50K SNP array for apple:AX-105208927
TypeSNP
SNP AllelesA/G
Probe 1RosBREEDSNP_SNP_AG_12453621_Lg14_02638_MAF40_MDP0000311542_exon1.probe: GATCTGCAAAAGCTTGGATACACCATGTCCATCATCAAAGACGTGCTCTT
5' Flanking SequenceGAGTTAAAGCGGATCTGCAAAAGCTTGGATACACCATGTCCATCATCAAAGACGTGCTCT T
3' Flanking SequenceGATGCCGAAGAGAAGCAGAAACATAATAAGCAGCTACGCAGTTGGCTACAACAACTTAAT G
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-MM-F114N/A22.1a475881053View
Sequence
>RosBREEDSNP_SNP_AG_12453621_Lg14_02638_MAF40_MDP0000311542_exon1 ID=RosBREEDSNP_SNP_AG_12453621_Lg14_02638_MAF40_MDP0000311542_exon1; Name=RosBREEDSNP_SNP_AG_12453621_Lg14_02638_MAF40_MDP0000311542_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
GGATACACCATGTCCATCATCAAAGACGTGCTCTT[A/G]GATGCCGAAG
AGAAGCAGAAACATAATAAGCAGCT
Alignments
Feature NameTypeLocationAnalysis
MDC021896.471 contig MDC021896.471:14154..14154. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr14 chromosome Chr14:8024518..8024518+ Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation