RosBREEDSNP_SNP_AC_12035560_Lg5_01319_MAF50_9918_exon2, RosBREEDSNP_SNP_AC_12035560_Lg5_01319_MAF50_9918_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AC_12035560_Lg5_01319_MAF50_9918_exon2
dbSNP IDss475878296
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AC_12035560_Lg5_01319_MAF50_9918_exon2
50K SNP array for apple:AX-105214850
TypeSNP
SNP AllelesA/C
5' Flanking SequenceAATTCGATGCCACTAAAACTTCATGCCATTGAAGA
3' Flanking SequenceTGGTCCGAAAGCAATTAGAAAGCAGGCTAGACAA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20135N/A29.2RosBREEDSNP_SNP_AC_12035560_Lg5_01319_MAF50_9918_exon2View
2Apple-M432-2013-physical-Malus-domestica5N/A12035560RosBREEDSNP_SNP_AC_12035560_Lg5_01319_MAF50_9918_exon2View
Sequence
>RosBREEDSNP_SNP_AC_12035560_Lg5_01319_MAF50_9918_exon2 ID=RosBREEDSNP_SNP_AC_12035560_Lg5_01319_MAF50_9918_exon2; Name=RosBREEDSNP_SNP_AC_12035560_Lg5_01319_MAF50_9918_exon2; organism=Malus x domestica; type=genetic_marker; length=70bp
AATTCGATGCCACTAAAACTTCATGCCATTGAAGAMTGGTCCGAAAGCAA
TTAGAAAGCAGGCTAGACAA
Alignments
Feature NameTypeLocationAnalysis
MDC013396.389 contig MDC013396.389:2709..2709. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr05 chromosome Chr05:36143814..36143814. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr05 chromosome Chr05:36143812..36143812. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation