RosBREEDSNP_SNP_TC_16650610_Lg8_01768_MAF50_MDP0000377353_exon2, RosBREEDSNP_SNP_TC_16650610_Lg8_01768_MAF50_MDP0000377353_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_16650610_Lg8_01768_MAF50_MDP0000377353_exon2
Aliasss475879096
rs267612042
b475879096
SNP_TC_16650610_Lg8_01768_MAF50_MDP0000377353_exon2
AX-105182914
dbSNP IDss475879096
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_16650610_Lg8_01768_MAF50_MDP0000377353_exon2
50K SNP array for apple:RosBREEDSNP_SNP_TC_16650610_Lg8_01768_MAF50_MDP0000377353_exon2
TypeSNP
SNP AllelesT/C
5' Flanking SequenceAAAAATAAAATAATCTCCCCACAAGCCTCTGATAT
3' Flanking SequenceGTTCCTTATGAGTAGGAACTTAATCTGAAAATAA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_TC_16650610_Lg8_01768_MAF50_MDP0000377353_exon2RosBREEDSNP_SNP_TC_16650610_Lg8_01768_MAF50_MDP0000377353_exon2Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_TC_16650610_Lg8_01768_MAF50_MDP0000377353_exon2 ID=RosBREEDSNP_SNP_TC_16650610_Lg8_01768_MAF50_MDP0000377353_exon2|Name=RosBREEDSNP_SNP_TC_16650610_Lg8_01768_MAF50_MDP0000377353_exon2|organism=Malus x domestica|type=genetic_marker|length=70bp
AAAAATAAAATAATCTCCCCACAAGCCTCTGATATYGTTCCTTATGAGTA
GGAACTTAATCTGAAAATAA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20138N/A32.29RosBREEDSNP_SNP_TC_16650610_Lg8_01768_MAF50_MDP0000377353_exon2View
2Apple-M432-2013-physical-Malus-domestica8N/A16650610RosBREEDSNP_SNP_TC_16650610_Lg8_01768_MAF50_MDP0000377353_exon2View
Alignments
Feature NameTypeLocationAnalysis
MDC043052.7 contig MDC043052.7:2246..2246. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr08 chromosome Chr08:10194738..10194738. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr08 chromosome Chr08:10194737..10194737. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation