RosBREEDSNP_SNP_CT_16165506_Lg2_02686_MAF40_1634950_exon3, RosBREEDSNP_SNP_CT_16165506_Lg2_02686_MAF40_1634950_exon3 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_16165506_Lg2_02686_MAF40_1634950_exon3
dbSNP IDss475883814
SNP Array ID
480K SNP array for apple:AX-105198930
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_16165506_Lg2_02686_MAF40_1634950_exon3
20K SNP array for apple:RosBREEDSNP_SNP_CT_16165506_Lg2_02686_MAF40_1634950_exon3
50K SNP array for apple:AX-105198930
TypeSNP
SNP AllelesA/G
Probe 1RosBREEDSNP_SNP_CT_16165506_Lg2_02686_MAF40_1634950_exon3.probe: TTCAAGTTTTTTCTCATTGCTACTCAATTTCTACAGTGTTATCAATTTTA
5' Flanking SequenceTTTTGGAAGTGAGTCACGTAAATAGTTAATGGAAAAATATACAATAAAAAACGTCAAAAT G
3' Flanking SequenceTAAAATTGATAACACTGTAGAAATTGAGTAGCAATGAGAAAAAACTTGAAAAAGACAAAA G
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-RosBREED-3.9K-20192N/A28.95RosBREEDSNP_SNP_CT_16165506_Lg2_02686_MAF40_1634950_exon3View
Sequence
>RosBREEDSNP_SNP_CT_16165506_Lg2_02686_MAF40_1634950_exon3 ID=RosBREEDSNP_SNP_CT_16165506_Lg2_02686_MAF40_1634950_exon3; Name=RosBREEDSNP_SNP_CT_16165506_Lg2_02686_MAF40_1634950_exon3; organism=Malus x domestica; type=genetic_marker; length=75bp
TAATGGAAAAATATACAATAAAAAACGTCAAAATG[C/T]TAAAATTGAT
AACACTGTAGAAATTGAGTAGCAAT
Alignments
Feature NameTypeLocationAnalysis
MDC015070.454 contig MDC015070.454:2174..2174. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr02 chromosome Chr02:13910501..13910501- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation