RosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1, RosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1
dbSNP IDss475876617
SNP Array ID
480K SNP array for apple:AX-115182538
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1
20K SNP array for apple:RosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1
50K SNP array for apple:AX-105185847
TypeSNP
SNP AllelesA/G
Probe 1RosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1.probe: CATCTTGTGGAGATCATCATCATCATCAGTACAGTAACTATGGTCGCATT
5' Flanking SequenceGGTGCTACTACTACATCTTGCCTAGTGGAATGAAGAAAATAAGGAGTAATATTATCACTA C
3' Flanking SequenceAATGCGACCATAGTTACTGTACTGATGATGATGATGATCTCCACAAGATGCGGGGGCATT T
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-Honeycrisp_Consensus-F117N/A15.94RosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1View
2Apple-RosBREED-3.9K-201917N/A15.94RosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1View
3Apple-BB-F117N/A17.67RosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1View
4Apple-NCZFBB-consensus17N/A14.1RosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1View
5Apple-ZF-F117N/A17.98RosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1View
Sequence
>RosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1 ID=RosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1; Name=RosBREEDSNP_SNP_CT_5879958_Lg17_251346_MAF50_251346_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
GGAATGAAGAAAATAAGGAGTAATATTATCACTAC[C/T]AATGCGACCA
TAGTTACTGTACTGATGATGATGAT