RosBREEDSNP_SNP_GA_37102564_Lg3_00664_MAF50_795768_exon1, RosBREEDSNP_SNP_GA_37102564_Lg3_00664_MAF50_795768_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_37102564_Lg3_00664_MAF50_795768_exon1
Aliasss475877817
rs267610763
c475877817
SNP_GA_37102564_Lg3_00664_MAF50_795768_exon1
AX-105221139
dbSNP IDss475877817
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_37102564_Lg3_00664_MAF50_795768_exon1
50K SNP array for apple:RosBREEDSNP_SNP_GA_37102564_Lg3_00664_MAF50_795768_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceGGTTTCGTTTCTCGAAGGTGAATTTGCAGGGCTTC
3' Flanking SequenceGAATGAGAGCGAAGAGAGAGAGAGGAGAGAGAGG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_GA_37102564_Lg3_00664_MAF50_795768_exon1RosBREEDSNP_SNP_GA_37102564_Lg3_00664_MAF50_795768_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_GA_37102564_Lg3_00664_MAF50_795768_exon1 ID=RosBREEDSNP_SNP_GA_37102564_Lg3_00664_MAF50_795768_exon1|Name=RosBREEDSNP_SNP_GA_37102564_Lg3_00664_MAF50_795768_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
GGTTTCGTTTCTCGAAGGTGAATTTGCAGGGCTTCRGAATGAGAGCGAAG
AGAGAGAGAGGAGAGAGAGG
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20133N/A62.3RosBREEDSNP_SNP_GA_37102564_Lg3_00664_MAF50_795768_exon1View
2Apple-M432-2013-physical-Malus-domestica3N/A37102564RosBREEDSNP_SNP_GA_37102564_Lg3_00664_MAF50_795768_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC002743.440 contig MDC002743.440:7121..7121. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr03 chromosome Chr03:35392056..35392056. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr03 chromosome Chr03:35392055..35392055. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation