RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5, RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5
dbSNP IDss475878137
SNP Array ID
480K SNP array for apple:AX-105218440
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5
20K SNP array for apple:RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5
50K SNP array for apple:AX-105218440
TypeSNP
SNP AllelesT/C
Probe 1RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5.probe: AGAATATGGATGTAATTGCAGGAATTGGGGGGAAATGCTTGGTGGTTTGA
5' Flanking SequenceGATTTAATGATAGAATATGGATGTAATTGCAGGAATTGGGGGGAAATGCTTGGTGGTTTG A
3' Flanking SequenceCGCTTTCTTGCTCAGCACATTGCAGTCTTCTATTATTTTATGACGGCCTTTATGTATTTA A
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-Honeycrisp_Consensus-F15N/A0RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5View
2Apple-RosBREED-3.9K-20195N/A80.91RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5View
3Apple-BB-F15N/A83.09RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5View
4Apple-NC-F15N/A117.53RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5View
5Apple-NCZFBB-consensus5N/A89.33RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5View
6Apple-ZF-F15N/A86.9RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5View
Sequence
>RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5 ID=RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5; Name=RosBREEDSNP_SNP_CT_781089_Lg5_00460_MAF20_361681_exon5; organism=Malus x domestica; type=genetic_marker; length=75bp
TTGCAGGAATTGGGGGGAAATGCTTGGTGGTTTGA[C/T]CGCTTTCTTG
CTCAGCACATTGCAGTCTTCTATTA