RosBREEDSNP_SNP_GA_34176489_Lg2_RosCOS2050_MAF20_41201_exon1, RosBREEDSNP_SNP_GA_34176489_Lg2_RosCOS2050_MAF20_41201_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_34176489_Lg2_RosCOS2050_MAF20_41201_exon1
dbSNP IDss475877378
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_34176489_Lg2_RosCOS2050_MAF20_41201_exon1
50K SNP array for apple:AX-105216964
TypeSNP
SNP AllelesA/G
5' Flanking SequenceAGCCAAATCGGCGAAACCCAATAGCCCATTTCTCA
3' Flanking SequenceAAAGATCACTGCTTTTGGGTGGTTACAGAGTCGC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20132N/A75RosBREEDSNP_SNP_GA_34176489_Lg2_RosCOS2050_MAF20_41201_exon1View
2Apple-M432-2013-physical-Malus-domestica2N/A34176489RosBREEDSNP_SNP_GA_34176489_Lg2_RosCOS2050_MAF20_41201_exon1View
Sequence
>RosBREEDSNP_SNP_GA_34176489_Lg2_RosCOS2050_MAF20_41201_exon1 ID=RosBREEDSNP_SNP_GA_34176489_Lg2_RosCOS2050_MAF20_41201_exon1; Name=RosBREEDSNP_SNP_GA_34176489_Lg2_RosCOS2050_MAF20_41201_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
AGCCAAATCGGCGAAACCCAATAGCCCATTTCTCARAAAGATCACTGCTT
TTGGGTGGTTACAGAGTCGC
Alignments
Feature NameTypeLocationAnalysis
MDC009250.269 contig MDC009250.269:3407..3407. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr02 chromosome Chr02:32423658..32423658. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation