RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4, RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4
dbSNP IDss475879697
SNP Array ID
480K SNP array for apple:AX-115182573
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4
20K SNP array for apple:RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4
50K SNP array for apple:AX-105220789
TypeSNP
SNP AllelesT/C
Probe 1RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4.probe: TTAACAGCCTTATGGAGTTCCTTTAAGTGGCCATACTTAGGTTGCCTGAT
5' Flanking SequenceGTGTAAATAGTACTAGACTACTAGTTTGCAGTCTTCTAACTCATAACTGATTTATAGGCT T
3' Flanking SequenceATCAGGCAACCTAAGTATGGCCACTTAAAGGAACTCCATAAGGCTGTTAAGCTATGTGAG C
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-MM-F110N/A23.8a475879697View
2Apple-Honeycrisp_Consensus-F110N/A17.98RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4View
3Apple-RosBREED-3.9K-201910N/A17.98RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4View
4Apple-BB-F110N/A21.37RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4View
5Apple-NCZFBB-consensus10N/A26.21RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4View
6Apple-ZF-F110N/A30.27RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4View
7Apple-consensus-Allard-2016LG10N/A16.04RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4View
Sequence
>RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4 ID=RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4; Name=RosBREEDSNP_SNP_GA_12053580_Lg10_RosCOS2353_MAF20_1671141_exon4; organism=Malus x domestica; type=genetic_marker; length=75bp
TGCAGTCTTCTAACTCATAACTGATTTATAGGCTT[A/G]ATCAGGCAAC
CTAAGTATGGCCACTTAAAGGAACT