RosBREEDSNP_SNP_CT_19507035_Lg5_01478_MAF30_1642139_exon2, RosBREEDSNP_SNP_CT_19507035_Lg5_01478_MAF30_1642139_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_19507035_Lg5_01478_MAF30_1642139_exon2
dbSNP IDss475878339
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_19507035_Lg5_01478_MAF30_1642139_exon2
50K SNP array for apple:AX-105183752
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTCTTGGGGGTCATTTGGATTAATCATCTTTCCCCC
3' Flanking SequenceACACCAGTTCGATCCTTACGGGCCTTATCAAAATA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20135N/A34.1RosBREEDSNP_SNP_CT_19507035_Lg5_01478_MAF30_1642139_exon2View
2Apple-M432-2013-physical-Malus-domestica5N/A19507035RosBREEDSNP_SNP_CT_19507035_Lg5_01478_MAF30_1642139_exon2View
3Apple-Honeycrisp_Consensus-F15N/A41.75RosBREEDSNP_SNP_CT_19507035_Lg5_01478_MAF30_1642139_exon2View
Sequence
>RosBREEDSNP_SNP_CT_19507035_Lg5_01478_MAF30_1642139_exon2 ID=RosBREEDSNP_SNP_CT_19507035_Lg5_01478_MAF30_1642139_exon2; Name=RosBREEDSNP_SNP_CT_19507035_Lg5_01478_MAF30_1642139_exon2; organism=Malus x domestica; type=genetic_marker; length=71bp
TCTTGGGGGTCATTTGGATTAATCATCTTTCCCCCRACACCAGTTCGATC
CTTACGGGCCTTATCAAAATA
Alignments
Feature NameTypeLocationAnalysis
MDC017238.86 contig MDC017238.86:8294..8294. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr05 chromosome Chr05:30098913..30098913. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation