RosBREEDSNP_SNP_TC_34463741_Lg5_RosCOS2737_MAF40_MDP0000858126_exon1, RosBREEDSNP_SNP_TC_34463741_Lg5_RosCOS2737_MAF40_MDP0000858126_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_34463741_Lg5_RosCOS2737_MAF40_MDP0000858126_exon1
Aliasss475878459
rs267611405
b475878459
SNP_TC_34463741_Lg5_RosCOS2737_MAF40_MDP0000858126_exon1
AX-105202181
dbSNP IDss475878459
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_34463741_Lg5_RosCOS2737_MAF40_MDP0000858126_exon1
50K SNP array for apple:RosBREEDSNP_SNP_TC_34463741_Lg5_RosCOS2737_MAF40_MDP0000858126_exon1
TypeSNP
SNP AllelesT/C
5' Flanking SequenceGGCGACAAATTGAACGAAGAGCAAATCAAAGAAAT
3' Flanking SequenceGAGCGTGTGCATCGCCAACTACTTATGAGTTCCGG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_TC_34463741_Lg5_RosCOS2737_MAF40_MDP0000858126_exon1RosBREEDSNP_SNP_TC_34463741_Lg5_RosCOS2737_MAF40_MDP0000858126_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_TC_34463741_Lg5_RosCOS2737_MAF40_MDP0000858126_exon1 ID=RosBREEDSNP_SNP_TC_34463741_Lg5_RosCOS2737_MAF40_MDP0000858126_exon1|Name=RosBREEDSNP_SNP_TC_34463741_Lg5_RosCOS2737_MAF40_MDP0000858126_exon1|organism=Malus x domestica|type=genetic_marker|length=71bp
GGCGACAAATTGAACGAAGAGCAAATCAAAGAAATYGAGCGTGTGCATCG
CCAACTACTTATGAGTTCCGG
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20131N/A55.98RosBREEDSNP_SNP_TC_34463741_Lg5_RosCOS2737_MAF40_MDP0000858126_exon1View
2Apple-M432-2013-physical-Malus-domestica5N/A34463741RosBREEDSNP_SNP_TC_34463741_Lg5_RosCOS2737_MAF40_MDP0000858126_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC012099.177 contig MDC012099.177:3613..3613. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr01 chromosome Chr01:29944911..29944911. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr01 chromosome Chr01:29944910..29944910. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation