RosBREEDSNP_SNP_GT_2991122_Lg6_RosCOS408_MAF50_1685757_exon2, RosBREEDSNP_SNP_GT_2991122_Lg6_RosCOS408_MAF50_1685757_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GT_2991122_Lg6_RosCOS408_MAF50_1685757_exon2
dbSNP IDss475878499
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GT_2991122_Lg6_RosCOS408_MAF50_1685757_exon2
50K SNP array for apple:AX-105178883
TypeSNP
SNP AllelesT/G
5' Flanking SequenceTATCTTTAATTTAGAATACCTTATTTAATTTGCAG
3' Flanking SequenceTGCAACCCAGGCTCTTCTACAAAGCTGTCTCACT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20136N/A29.07RosBREEDSNP_SNP_GT_2991122_Lg6_RosCOS408_MAF50_1685757_exon2View
2Apple-M432-2013-physical-Malus-domestica6N/A2991122RosBREEDSNP_SNP_GT_2991122_Lg6_RosCOS408_MAF50_1685757_exon2View
3Apple-Honeycrisp_Consensus-F16N/A4.37RosBREEDSNP_SNP_GT_2991122_Lg6_RosCOS408_MAF50_1685757_exon2View
Sequence
>RosBREEDSNP_SNP_GT_2991122_Lg6_RosCOS408_MAF50_1685757_exon2 ID=RosBREEDSNP_SNP_GT_2991122_Lg6_RosCOS408_MAF50_1685757_exon2; Name=RosBREEDSNP_SNP_GT_2991122_Lg6_RosCOS408_MAF50_1685757_exon2; organism=Malus x domestica; type=genetic_marker; length=70bp
TATCTTTAATTTAGAATACCTTATTTAATTTGCAGKTGCAACCCAGGCTC
TTCTACAAAGCTGTCTCACT
Alignments
Feature NameTypeLocationAnalysis
MDC010209.878 contig MDC010209.878:3561..3561. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr06 chromosome Chr06:2398743..2398743. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation