RosBREEDSNP_SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1, RosBREEDSNP_SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1
dbSNP IDss475876943
SNP Array ID
480K SNP array for apple:AX-115182513
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1
20K SNP array for apple:RosBREEDSNP_SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1
50K SNP array for apple:AX-105176283
TypeSNP
SNP AllelesA/G
Probe 1RosBREEDSNP_SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1.probe: CAAGCCCAGTAAGTCATTTTTTTCGCTCCATCCATAGCCTAATCCTAGAC
5' Flanking SequenceCACTCTCTGTTGACAGAATCAAATAGTTCCGACCATAAGAACGAAAAATATAAAGGAGGT T
3' Flanking SequenceGTCTAGGATTAGGCTATGGATGGAGCGAAAAAAATGACTTACTGGGCTTGTCTGAAATCG C
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple_HCGA_F11N/A2.46SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1View
2Apple_HC64_F11N/A0.9SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1View
3Apple_HCMO_F11N/A61SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1View
4Apple_HGMM_Consenus1N/A67.95SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1View
5Apple-RosBREED-3.9K-20191N/A55.8SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1View
6apple-RosBREED-sweetness-2015LG1N/A87.4ss475876943View
7Apple-Honeycrisp_Consensus-F11N/A55.8RosBREEDSNP_SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1View
Sequence
>RosBREEDSNP_SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1 ID=RosBREEDSNP_SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1; Name=RosBREEDSNP_SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
TTCCGACCATAAGAACGAAAAATATAAAGGAGGTT[C/T]GTCTAGGATT
AGGCTATGGATGGAGCGAAAAAAAT