RosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3, RosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3
dbSNP IDss475878703
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3
50K SNP array for apple:AX-105193562
TypeSNP
SNP AllelesA/G
5' Flanking SequenceGGCCCATATTGGCGCCGTATTCGGAAACTCTGCAC
3' Flanking SequenceCTTCAACTTCTTTGTCCCTCGAAAATCGAGGGTT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20136N/A81.4RosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3View
2Apple-M432-2013-physical-Malus-domestica6N/A27789755RosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3View
3Apple-BB-F16N/A59.74RosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3View
4Apple-NC-F16N/A74.59RosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3View
5Apple-NCZFBB-consensus6N/A59.7RosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3View
6Apple-ZF-F16N/A60.57RosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3View
7Pear-PH-CG-2017LG6N/A61.01RosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3View
Sequence
>RosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3 ID=RosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3; Name=RosBREEDSNP_SNP_GA_27789755_Lg6_RosCOS750_MAF10_MDP0000600124_exon3; organism=Malus x domestica; type=genetic_marker; length=70bp
GGCCCATATTGGCGCCGTATTCGGAAACTCTGCACRCTTCAACTTCTTTG
TCCCTCGAAAATCGAGGGTT
Alignments
Feature NameTypeLocationAnalysis
MDC020598.85 contig MDC020598.85:1026..1026. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr06 chromosome Chr06:34714864..34714864. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation