RosBREEDSNP_SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1, RosBREEDSNP_SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1
Aliasss475879143
rs267612089
a475879143
SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1
AX-105199474
dbSNP IDss475879143
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1
50K SNP array for apple:RosBREEDSNP_SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceGGAAAGTTCATAACTTTAGTTTGTTTAAGGAGATG
3' Flanking SequenceTTAAGAATCAGAAGATAATGAGCCCGGTGTTTCCT
SpeciesMalus x domestica
PolymorphismP_ RosBREEDSNP_SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1RosBREEDSNP_SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1 ID=RosBREEDSNP_SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1|Name=RosBREEDSNP_SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1|organism=Malus x domestica|type=genetic_marker|length=71bp
GGAAAGTTCATAACTTTAGTTTGTTTAAGGAGATGRTTAAGAATCAGAAG
ATAATGAGCCCGGTGTTTCCT
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20138N/A41.31RosBREEDSNP_SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1View
2Apple-M432-2013-physical-Malus-domestica8N/A22580590RosBREEDSNP_SNP_GA_22580590_Lg8_01479_MAF50_MDP0000308808_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC019835.139 contig MDC019835.139:10385..10385. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr08 chromosome Chr08:17420466..17420466. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr08 chromosome Chr08:17420465..17420465. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation