RosBREEDSNP_SNP_AC_2492599_Lg10_01909_MAF20_822485_exon1, RosBREEDSNP_SNP_AC_2492599_Lg10_01909_MAF20_822485_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AC_2492599_Lg10_01909_MAF20_822485_exon1
dbSNP IDss475879623
SNP Array ID
480K SNP array for apple:AX-115182176
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AC_2492599_Lg10_01909_MAF20_822485_exon1
20K SNP array for apple:RosBREEDSNP_SNP_AC_2492599_Lg10_01909_MAF20_822485_exon1
TypeSNP
SNP AllelesA/C
Probe 1RosBREEDSNP_SNP_AC_2492599_Lg10_01909_MAF20_822485_exon1.probe: GGGTTTTGAATTCCAATTCCTCCTCCTCCTCCGCCTTCTTCAAATCTCAA
5' Flanking SequenceCCTCCCATCGAGGGTTTTGAATTCCAATTCCTCCTCCTCCTCCGCCTTCTTCAAATCTCA A
3' Flanking SequenceCTTTGCTGTGCGATTTGGAATCGGAACCCTAACTATCGAGCCTTGGATCTTAAAGGGTTC C
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Libraries
Library NameType
20K SNP array for appleSNP_chip
480K SNP array for appleSNP_chip
IRSC 9K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AC_2492599_Lg10_01909_MAF20_822485_exon1 ID=RosBREEDSNP_SNP_AC_2492599_Lg10_01909_MAF20_822485_exon1; Name=RosBREEDSNP_SNP_AC_2492599_Lg10_01909_MAF20_822485_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
ATTCCTCCTCCTCCTCCGCCTTCTTCAAATCTCAA[A/C]CTTTGCTGTG
CGATTTGGAATCGGAACCCTAACTA
Alignments
Feature NameTypeLocationAnalysis
MDC012944.357 contig MDC012944.357:20063..20063. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr10 chromosome Chr10:3031789..3031789+ Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation