RosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4, RosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4
Aliasss475876785
rs267609732
c475876785
SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4
AX-105179912
dbSNP IDss475876785
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4
50K SNP array for apple:RosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4
TypeSNP
SNP AllelesT/C
5' Flanking SequenceCCTTCTTGCTTCGGTGCTGCGAGATAAATACTTCC
3' Flanking SequenceGGGGAAACCCTTTGGGGAAGCTTCTAGAGGGAAG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4RosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4 ID=RosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4|Name=RosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4|organism=Malus x domestica|type=genetic_marker|length=70bp
CCTTCTTGCTTCGGTGCTGCGAGATAAATACTTCCYGGGGAAACCCTTTG
GGGAAGCTTCTAGAGGGAAG
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20133N/A6.7RosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4View
2Apple-M432-2013-physical-Malus-domestica1N/A17886905RosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4View
Alignments
Feature NameTypeLocationAnalysis
MDC013531.194 contig MDC013531.194:32735..32735. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr01 chromosome Chr01:22123811..22123811. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr01 chromosome Chr01:22123810..22123810. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation