RosBREEDSNP_SNP_TC_24383524_Lg5_AT11_MAF10_MDP0000284524_exon3, RosBREEDSNP_SNP_TC_24383524_Lg5_AT11_MAF10_MDP0000284524_exon3 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_24383524_Lg5_AT11_MAF10_MDP0000284524_exon3
dbSNP IDss475878385
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_24383524_Lg5_AT11_MAF10_MDP0000284524_exon3
50K SNP array for apple:AX-105201586
TypeSNP
SNP AllelesT/C
5' Flanking SequenceGCTTCTTTAAAGTTGGTAGGGATATCTGTTTCGAT
3' Flanking SequenceACTGGCAATGCGTATGCCATACATGAAACACAAT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple_HCGA_F19N/A28.81SNP_TC_24383524_Lg5_AT11_MAF10_MDP0000284524_exon3View
2Apple_HGMM_Consenus9N/A24.38SNP_TC_24383524_Lg5_AT11_MAF10_MDP0000284524_exon3View
3Apple-M432-20139N/A25.89SNP_TC_24383524_Lg5_AT11_MAF10_MDP0000284524_exon3View
4Apple-M432-2013-physical-Malus-domestica5N/A24383524SNP_TC_24383524_Lg5_AT11_MAF10_MDP0000284524_exon3View
Sequence
>RosBREEDSNP_SNP_TC_24383524_Lg5_AT11_MAF10_MDP0000284524_exon3 ID=RosBREEDSNP_SNP_TC_24383524_Lg5_AT11_MAF10_MDP0000284524_exon3; Name=RosBREEDSNP_SNP_TC_24383524_Lg5_AT11_MAF10_MDP0000284524_exon3; organism=Malus x domestica; type=genetic_marker; length=70bp
GCTTCTTTAAAGTTGGTAGGGATATCTGTTTCGATYACTGGCAATGCGTA
TGCCATACATGAAACACAAT
Alignments
Feature NameTypeLocationAnalysis
MDC030030.9 contig MDC030030.9:126..126. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr16 chromosome Chr16:2120284..2120284. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation