RosBREEDSNP_SNP_CT_2671029_Lg17_00210_MAF50_MDP0000437795_exon1, RosBREEDSNP_SNP_CT_2671029_Lg17_00210_MAF50_MDP0000437795_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_2671029_Lg17_00210_MAF50_MDP0000437795_exon1
Aliasss475881982
rs267614927
c475881982
SNP_CT_2671029_Lg17_00210_MAF50_MDP0000437795_exon1
AX-105207951
dbSNP IDss475881982
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_2671029_Lg17_00210_MAF50_MDP0000437795_exon1
50K SNP array for apple:RosBREEDSNP_SNP_CT_2671029_Lg17_00210_MAF50_MDP0000437795_exon1
TypeSNP
SNP AllelesT/C
5' Flanking SequenceATCAGGAACGCAGTTTTCTCCTTATCGAGCTCGTG
3' Flanking SequenceATGGCTATTTGGTTGTAACCGGAGTATGCGTCCA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_CT_2671029_Lg17_00210_MAF50_MDP0000437795_exon1RosBREEDSNP_SNP_CT_2671029_Lg17_00210_MAF50_MDP0000437795_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_CT_2671029_Lg17_00210_MAF50_MDP0000437795_exon1 ID=RosBREEDSNP_SNP_CT_2671029_Lg17_00210_MAF50_MDP0000437795_exon1|Name=RosBREEDSNP_SNP_CT_2671029_Lg17_00210_MAF50_MDP0000437795_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
ATCAGGAACGCAGTTTTCTCCTTATCGAGCTCGTGYATGGCTATTTGGTT
GTAACCGGAGTATGCGTCCA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20134N/A10.86RosBREEDSNP_SNP_CT_2671029_Lg17_00210_MAF50_MDP0000437795_exon1View
2Apple-M432-2013-physical-Malus-domestica17N/A2671029RosBREEDSNP_SNP_CT_2671029_Lg17_00210_MAF50_MDP0000437795_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC021935.139 contig MDC021935.139:1139..1139. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr17 chromosome Chr17:2871338..2871338. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr17 chromosome Chr17:2871337..2871337. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation