RosBREEDSNP_SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1, RosBREEDSNP_SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1
dbSNP IDss475877586
SNP Array ID
480K SNP array for apple:AX-115182554
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1
20K SNP array for apple:RosBREEDSNP_SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1
50K SNP array for apple:AX-105182425
TypeSNP
SNP AllelesA/G
Probe 1RosBREEDSNP_SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1.probe: TCTCCCAACCCGATCCGATCCCGACACGAACAATTCTATGACAAAAATCT
5' Flanking SequenceAAACAGCTCAATCTCTCTCTCTCTCTCTCTTTTTTTTTTTTCAAATTTTTTGTTGCTTTT T
3' Flanking SequenceAGATTTTTGTCATAGAATTGTTCGTGTCGGGATCGGATCGGGTTGGGAGAAAAATCAGGA G
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple_HC64_F13N/A14.66SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1View
2Apple_HGMM_Consenus3N/A14.66SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1View
3Apple-RosBREED-3.9K-20193N/A14.68SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1View
4Apple-consensus-Allard-2016LG3N/A25.11SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1View
5Apple-MM-F13N/A24.5a475877586View
6Apple-Honeycrisp_Consensus-F13N/A14.68RosBREEDSNP_SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1View
Sequence
>RosBREEDSNP_SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1 ID=RosBREEDSNP_SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1; Name=RosBREEDSNP_SNP_CT_8516804_Lg3_RosCOS3572_MAF30_324882_exon1; organism=Malus x domestica; type=genetic_marker; length=75bp
CTCTTTTTTTTTTTTCAAATTTTTTGTTGCTTTTT[C/T]AGATTTTTGT
CATAGAATTGTTCGTGTCGGGATCG