RosBREEDSNP_SNP_GT_3881154_Lg4_00966_MAF20_MDP0000183381_exon3, RosBREEDSNP_SNP_GT_3881154_Lg4_00966_MAF20_MDP0000183381_exon3 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GT_3881154_Lg4_00966_MAF20_MDP0000183381_exon3
dbSNP IDss475877866
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GT_3881154_Lg4_00966_MAF20_MDP0000183381_exon3
50K SNP array for apple:AX-105215693
TypeSNP
SNP AllelesT/G
5' Flanking SequenceGGCCTTAAGTAAACGGATAGAGCAAGACAAGGAGA
3' Flanking SequenceATGCCTCATCTTAGGTGACTTCAATGATATTCTG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20134N/A22.84RosBREEDSNP_SNP_GT_3881154_Lg4_00966_MAF20_MDP0000183381_exon3View
2Apple-M432-2013-physical-Malus-domestica4N/A3881154RosBREEDSNP_SNP_GT_3881154_Lg4_00966_MAF20_MDP0000183381_exon3View
3Apple-Honeycrisp_Consensus-F14N/A13.35RosBREEDSNP_SNP_GT_3881154_Lg4_00966_MAF20_MDP0000183381_exon3View
Sequence
>RosBREEDSNP_SNP_GT_3881154_Lg4_00966_MAF20_MDP0000183381_exon3 ID=RosBREEDSNP_SNP_GT_3881154_Lg4_00966_MAF20_MDP0000183381_exon3; Name=RosBREEDSNP_SNP_GT_3881154_Lg4_00966_MAF20_MDP0000183381_exon3; organism=Malus x domestica; type=genetic_marker; length=70bp
GGCCTTAAGTAAACGGATAGAGCAAGACAAGGAGAKATGCCTCATCTTAG
GTGACTTCAATGATATTCTG
Alignments
Feature NameTypeLocationAnalysis
MDC006895.964 contig MDC006895.964:17143..17143. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr12 chromosome Chr12:16161820..16161820. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr12 chromosome Chr12:16161818..16161818. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation