RosBREEDSNP_SNP_TC_20176551_Lg6_01831_MAF50_MDP0000218928_exon1, RosBREEDSNP_SNP_TC_20176551_Lg6_01831_MAF50_MDP0000218928_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_20176551_Lg6_01831_MAF50_MDP0000218928_exon1
dbSNP IDss475878626
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_20176551_Lg6_01831_MAF50_MDP0000218928_exon1
50K SNP array for apple:AX-105198518
TypeSNP
SNP AllelesT/C
5' Flanking SequenceAGGTGTTGGACCCCACAAATCACTATGTATCAACT
3' Flanking SequenceAAAAGGAACCACATATTTTGATTGAACATACTGA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20135N/A66.1RosBREEDSNP_SNP_TC_20176551_Lg6_01831_MAF50_MDP0000218928_exon1View
2Apple-M432-2013-physical-Malus-domestica6N/A20176551RosBREEDSNP_SNP_TC_20176551_Lg6_01831_MAF50_MDP0000218928_exon1View
Sequence
>RosBREEDSNP_SNP_TC_20176551_Lg6_01831_MAF50_MDP0000218928_exon1 ID=RosBREEDSNP_SNP_TC_20176551_Lg6_01831_MAF50_MDP0000218928_exon1; Name=RosBREEDSNP_SNP_TC_20176551_Lg6_01831_MAF50_MDP0000218928_exon1; organism=Malus x domestica; type=genetic_marker; length=70bp
AGGTGTTGGACCCCACAAATCACTATGTATCAACTYAAAAGGAACCACAT
ATTTTGATTGAACATACTGA
Alignments
Feature NameTypeLocationAnalysis
MDC020588.530 contig MDC020588.530:37017..37017. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr05 chromosome Chr05:5306866..5306866. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr05 chromosome Chr05:5306864..5306864. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation