RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1, RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1
Aliasss475877827
rs267610773
c475877827
SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1
AX-105179743
dbSNP IDss475877827
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1
50K SNP array for apple:RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTGCGACGAGAAGGTTTTCAAAGCGAACAAGCTCAT
3' Flanking SequenceAGCAAGCACCAGAGGGTTCATCTGTCTTCCTCCC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1 ID=RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1|Name=RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
TGCGACGAGAAGGTTTTCAAAGCGAACAAGCTCATRAGCAAGCACCAGAG
GGTTCATCTGTCTTCCTCCC
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20133N/A55.3RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1View
2Apple-M432-2013-physical-Malus-domestica3N/A37575211RosBREEDSNP_SNP_GA_37575211_Lg3_01822_MAF40_MDP0000172036_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC007482.376 contig MDC007482.376:784..784. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr03 chromosome Chr03:33815641..33815641. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation