RosBREEDSNP_SNP_TC_37585473_Lg3_01822_MAF50_MDP0000247441_exon2, RosBREEDSNP_SNP_TC_37585473_Lg3_01822_MAF50_MDP0000247441_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_37585473_Lg3_01822_MAF50_MDP0000247441_exon2
Aliasss475877828
rs267610774
c475877828
SNP_TC_37585473_Lg3_01822_MAF50_MDP0000247441_exon2
AX-105186118
dbSNP IDss475877828
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_37585473_Lg3_01822_MAF50_MDP0000247441_exon2
50K SNP array for apple:RosBREEDSNP_SNP_TC_37585473_Lg3_01822_MAF50_MDP0000247441_exon2
TypeSNP
SNP AllelesT/C
5' Flanking SequenceCTCTACACTTCAATCAAACCCTCGAAGCGCCAAAG
3' Flanking SequenceAGATGTCAAAGGCTTAGGCATCATAATGGTTGAT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_TC_37585473_Lg3_01822_MAF50_MDP0000247441_exon2RosBREEDSNP_SNP_TC_37585473_Lg3_01822_MAF50_MDP0000247441_exon2Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_TC_37585473_Lg3_01822_MAF50_MDP0000247441_exon2 ID=RosBREEDSNP_SNP_TC_37585473_Lg3_01822_MAF50_MDP0000247441_exon2|Name=RosBREEDSNP_SNP_TC_37585473_Lg3_01822_MAF50_MDP0000247441_exon2|organism=Malus x domestica|type=genetic_marker|length=70bp
CTCTACACTTCAATCAAACCCTCGAAGCGCCAAAGYAGATGTCAAAGGCT
TAGGCATCATAATGGTTGAT
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20133N/A55.3RosBREEDSNP_SNP_TC_37585473_Lg3_01822_MAF50_MDP0000247441_exon2View
2Apple-M432-2013-physical-Malus-domestica3N/A37585473RosBREEDSNP_SNP_TC_37585473_Lg3_01822_MAF50_MDP0000247441_exon2View
Alignments
Feature NameTypeLocationAnalysis
MDC003132.484 contig MDC003132.484:9115..9115. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr03 chromosome Chr03:33768847..33768847. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr03 chromosome Chr03:33808399..33808399. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr03 chromosome Chr03:33768845..33768845. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation