RosBREEDSNP_SNP_TC_3538550_Lg12_01391_MAF40_1676938_exon2, RosBREEDSNP_SNP_TC_3538550_Lg12_01391_MAF40_1676938_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_TC_3538550_Lg12_01391_MAF40_1676938_exon2
dbSNP IDss475880387
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_TC_3538550_Lg12_01391_MAF40_1676938_exon2
50K SNP array for apple:AX-105202623
TypeSNP
SNP AllelesT/C
5' Flanking SequenceAATCAGAAAAGCATCTCTCTCTCTCTTCTCCCTCT
3' Flanking SequenceCCACACCACACTTCTTCTTCTTCCTTTCTGCAAC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201312N/A7.07RosBREEDSNP_SNP_TC_3538550_Lg12_01391_MAF40_1676938_exon2View
2Apple-M432-2013-physical-Malus-domestica12N/A3538550RosBREEDSNP_SNP_TC_3538550_Lg12_01391_MAF40_1676938_exon2View
Sequence
>RosBREEDSNP_SNP_TC_3538550_Lg12_01391_MAF40_1676938_exon2 ID=RosBREEDSNP_SNP_TC_3538550_Lg12_01391_MAF40_1676938_exon2; Name=RosBREEDSNP_SNP_TC_3538550_Lg12_01391_MAF40_1676938_exon2; organism=Malus x domestica; type=genetic_marker; length=70bp
AATCAGAAAAGCATCTCTCTCTCTCTTCTCCCTCTYCCACACCACACTTC
TTCTTCTTCCTTTCTGCAAC
Alignments
Feature NameTypeLocationAnalysis
MDC007698.487 contig MDC007698.487:9814..9814. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr12 chromosome Chr12:3591991..3591991. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation