RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8, RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8
dbSNP IDss475878949
SNP Array ID
480K SNP array for apple:AX-105223889
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8
20K SNP array for apple:RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8
50K SNP array for apple:AX-105223889
TypeSNP
SNP AllelesA/G
Probe 1RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8.probe: TGTAGACAAAACATTCCACGTGTGTCTTCCTCAATCGGCCACGACCCAAC
5' Flanking SequenceGCAAGAAAAAGCCAAAAGTGATCGTCGTCCAAGCAGAGATCGTGAACTGCAAGACAGCCA G
3' Flanking SequenceGTTGGGTCGTGGCCGATTGAGGAAGACACACGTGGAATGTTTTGTCTACACGCCTGATTT A
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-MM-F18N/A0a475878949View
2Apple-Honeycrisp_Consensus-F18N/A0.99RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8View
3Apple-RosBREED-3.9K-20198N/A0.99RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8View
4Apple-BB-F18N/A2.28RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8View
5Apple-NC-F18N/A0.44RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8View
6Apple-NCZFBB-consensus8N/A2.03RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8View
7Apple-ZF-F18N/A0RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8View
Sequence
>RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8 ID=RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8; Name=RosBREEDSNP_SNP_CT_637380_Lg8_00175_MAF30_MDP0000312559_exon8; organism=Malus x domestica; type=genetic_marker; length=75bp
GTCCAAGCAGAGATCGTGAACTGCAAGACAGCCAG[C/T]GTTGGGTCGT
GGCCGATTGAGGAAGACACACGTGG