RosBREEDSNP_SNP_CT_6047197_Lg16_01003_MAF50_153552_exon2, RosBREEDSNP_SNP_CT_6047197_Lg16_01003_MAF50_153552_exon2 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_CT_6047197_Lg16_01003_MAF50_153552_exon2
dbSNP IDss475881787
SNP Array ID
480K SNP array for apple:AX-105214770
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_CT_6047197_Lg16_01003_MAF50_153552_exon2
20K SNP array for apple:RosBREEDSNP_SNP_CT_6047197_Lg16_01003_MAF50_153552_exon2
50K SNP array for apple:AX-105214770
TypeSNP
SNP AllelesT/C
Probe 1RosBREEDSNP_SNP_CT_6047197_Lg16_01003_MAF50_153552_exon2.probe: GAATTACTACTCCCATTATTCAAAGCTCCACCAGTGGATTGCCCGTTCTG
5' Flanking SequenceCTGTCACGTGGGAATTACTACTCCCATTATTCAAAGCTCCACCAGTGGATTGCCCGTTCT G
3' Flanking SequenceTGCGGCTCCAGCGCTTTCTTTCTACCAAACTTGGCATCATAATACAATTTAAAATCCTTA A
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-201316N/A28.69RosBREEDSNP_SNP_CT_6047197_Lg16_01003_MAF50_153552_exon2View
2Apple-M432-2013-physical-Malus-domestica16N/A6047197RosBREEDSNP_SNP_CT_6047197_Lg16_01003_MAF50_153552_exon2View
3Apple-RosBREED-3.9K-201916N/A22.08RosBREEDSNP_SNP_CT_6047197_Lg16_01003_MAF50_153552_exon2View
Sequence
>RosBREEDSNP_SNP_CT_6047197_Lg16_01003_MAF50_153552_exon2 ID=RosBREEDSNP_SNP_CT_6047197_Lg16_01003_MAF50_153552_exon2; Name=RosBREEDSNP_SNP_CT_6047197_Lg16_01003_MAF50_153552_exon2; organism=Malus x domestica; type=genetic_marker; length=75bp
TTATTCAAAGCTCCACCAGTGGATTGCCCGTTCTG[C/T]TGCGGCTCCA
GCGCTTTCTTTCTACCAAACTTGGC