RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4, RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4
Aliasss475883437
rs267616193
c475883437
SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4
AX-105200538
dbSNP IDss475883437
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4
50K SNP array for apple:RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4
TypeSNP
SNP AllelesT/G
5' Flanking SequenceAATACAAACCAAATTCCTCTGTATCCATCATGACA
3' Flanking SequenceCTATTTCAGTTAGCTTTTAGATCTCAAGAAAATG
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4Malus x domesticamarker_locus
RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4-149.1Malus x domesticamarker_locus
RosBREED_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4RosBREED_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4 ID=RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4|Name=RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4|organism=Malus x domestica|type=genetic_marker|length=70bp
AATACAAACCAAATTCCTCTGTATCCATCATGACAKCTATTTCAGTTAGC
TTTTAGATCTCAAGAAAATG
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20133N/A37.3RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4View
2Apple-M432-2013-physical-Malus-domestica2N/A4854431RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4View
3Pear-PH-CG-2017LG15N/A149.1RosBREEDSNP_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4View
4Pear-PM-F1-PEAR315N/A58.04RosBREED_SNP_GT_4854431_Lg2_RosCOS3565_MAF10_MDP0000222804_exon4View
Alignments
Feature NameTypeLocationAnalysis
MDC003918.382 contig MDC003918.382:1847..1847. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr06 chromosome Chr06:33045973..33045973. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr06 chromosome Chr06:33045971..33045971. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation