GR:4:7-13, GR:4:7-13 (haplotype_block) Prunus cerasus

Haplotype Block Overview
Name GR:4:7-13
Species Prunus cerasus
Stock Haplotype [view all 9]
Haplotype [view all]
Projects
Project Name
RosBREED_Tart_Cherry_Haplotype_2019
Stock Haplotype
NameHaplotype
Montmorency a d i l
Tamaris b m q
Ujfehertoi Furtos a h k n
Rheinische Schattenmorelle b d g i
25-02-29 a b c d
25-14-20 a g h j
M172 d e f h
Surefire g i k o
Englaise_Timpurii a m n p
Map Positions
Haplotype BlockMap NameLinkage GroupStartStop
GR:4:7-13Sour Cherry-M172x25-F1LG426.834.1
Haplotypes
Marker abcdefghijklmnopq
Pa1Cl_snp_sweet_cherry_Pp4_09145953BBBBBBBABBBBBBBBB
RosBREED_snp_sweet_cherry_Pp4_07309282ABABABABABABAABBA
RosBREED_snp_sweet_cherry_Pp4_07429956AABBABABABAAABABB
RosBREED_snp_sweet_cherry_Pp4_07666480ABBBBBABBBBBABBBB
RosBREED_snp_sweet_cherry_Pp4_07706352BAAABBBBBABABBABA
RosBREED_snp_sweet_cherry_Pp4_07731253ABBBABABABABAABBA
RosBREED_snp_sweet_cherry_Pp4_07835311ABBBABABABABAABBA
RosBREED_snp_sweet_cherry_Pp4_08500917ABBBBBABBBBBABBAA
RosBREED_snp_sweet_cherry_Pp4_08538987ABBBABABABABAABBB
RosBREED_snp_sweet_cherry_Pp4_08950735BAAABABABABABBAAA
RosBREED_snp_sweet_cherry_Pp4_09148953ABAAAAABABAAABAAA
RosBREED_snp_sweet_cherry_Pp4_09660471ABBBABABABABABBBB
RosBREED_snp_sweet_cherry_Pp4_10145480ABAABBBBBBBAAAAAA
RosBREED_snp_sweet_cherry_Pp4_10230259BBAABBBBBBBABAAAA
RosBREED_snp_sweet_cherry_Pp4_10402945BAAABABABABABAAAA
RosBREED_snp_sweet_cherry_Pp4_11034104ABBBABABABABAABBB
RosBREED_snp_sweet_cherry_Pp4_11510521BAAABABBBABABAAAA
RosBREED_snp_sweet_cherry_Pp4_11588410BBBBBBBBBBBBABBBB
RosBREED_snp_sweet_cherry_Pp4_11651543BBBABABABBBBBAAAA
RosBREED_snp_sweet_cherry_Pp4_12567325ABBBABABABABAABBB
RosBREED_snp_tart_cherry_a_Pp4_07398453BAABBABBBBBABAABA
RosBREED_snp_tart_cherry_a_Pp4_07813828ABBBABABABABAABBB
RosBREED_snp_tart_cherry_a_Pp4_07861540BAAABABABABABAAAA
RosBREED_snp_tart_cherry_a_Pp4_08495239AABBABABAAABABABB
RosBREED_snp_tart_cherry_a_Pp4_08955576AABBABAAAAABABABB
RosBREED_snp_tart_cherry_a_Pp4_11651018BBBABABABBBBBAAAB
RosBREED_snp_tart_cherry_a_Pp4_11979679ABBBABABABABABBBB
RosBREED_snp_tart_cherry_a_Pp4_12532690BAAABABABABABAAAA
RosBREED_snp_tart_cherry_f_Pp4_07434938ABBBABABBBBBABBBB
RosBREED_snp_tart_cherry_f_Pp4_07862326ABBBBBABBBBBABBBB
RosBREED_snp_tart_cherry_f_Pp4_08425845AAAABAAABABAAAAAA
RosBREED_snp_tart_cherry_f_Pp4_08893154BBBBABBBABABBBBBB
RosBREED_snp_tart_cherry_f_Pp4_09732651BBBBBBBBABBBBBBBB
RosBREED_snp_tart_cherry_f_Pp4_10832168ABBBBBBBBBBBABBBB
RosBREED_snp_tart_cherry_f_Pp4_11135825ABBBBBBBBBBBABBBB
RosBREED_snp_tart_cherry_f_Pp4_12520610BAAABABABABABAAAA
RosCOS1363-161_snp_sweet_cherry_Pp4_10403896BAABBBBABABABAABB
RosCOS3576-320_snp_sweet_cherry_Pp4_10184012BBBBBBBBBBBBBABBB
RosCOS3576-387_snp_sweet_cherry_Pp4_10183945ABBBABABABABABBBB
Relationships

This haplotype_block contains the following genetic_marker feature(s):

Feature NameUnique NameSpeciesType
RosBREED_snp_sweet_cherry_Pp4_07309282RosBREED_snp_sweet_cherry_Pp4_07309282Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_07429956RosBREED_snp_sweet_cherry_Pp4_07429956Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_07666480RosBREED_snp_sweet_cherry_Pp4_07666480Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_07706352RosBREED_snp_sweet_cherry_Pp4_07706352Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_07731253RosBREED_snp_sweet_cherry_Pp4_07731253Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_07835311RosBREED_snp_sweet_cherry_Pp4_07835311Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_08500917RosBREED_snp_sweet_cherry_Pp4_08500917Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_08538987RosBREED_snp_sweet_cherry_Pp4_08538987Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_08950735RosBREED_snp_sweet_cherry_Pp4_08950735Prunus aviumgenetic_marker
Pa1Cl_snp_sweet_cherry_Pp4_09145953Pa1Cl_snp_sweet_cherry_Pp4_09145953Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_09148953RosBREED_snp_sweet_cherry_Pp4_09148953Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_09660471RosBREED_snp_sweet_cherry_Pp4_09660471Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_10145480RosBREED_snp_sweet_cherry_Pp4_10145480Prunus aviumgenetic_marker
RosCOS3576-387_snp_sweet_cherry_Pp4_10183945RosCOS3576-387_snp_sweet_cherry_Pp4_10183945Prunus aviumgenetic_marker
RosCOS3576-320_snp_sweet_cherry_Pp4_10184012RosCOS3576-320_snp_sweet_cherry_Pp4_10184012Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_10230259RosBREED_snp_sweet_cherry_Pp4_10230259Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_10402945RosBREED_snp_sweet_cherry_Pp4_10402945Prunus aviumgenetic_marker
RosCOS1363-161_snp_sweet_cherry_Pp4_10403896RosCOS1363-161_snp_sweet_cherry_Pp4_10403896Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_11034104RosBREED_snp_sweet_cherry_Pp4_11034104Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_11510521RosBREED_snp_sweet_cherry_Pp4_11510521Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_11588410RosBREED_snp_sweet_cherry_Pp4_11588410Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_11651543RosBREED_snp_sweet_cherry_Pp4_11651543Prunus aviumgenetic_marker
RosBREED_snp_sweet_cherry_Pp4_12567325RosBREED_snp_sweet_cherry_Pp4_12567325Prunus aviumgenetic_marker
RosBREED_snp_tart_cherry_a_Pp4_07398453RosBREED_snp_tart_cherry_a_Pp4_07398453Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_f_Pp4_07434938RosBREED_snp_tart_cherry_f_Pp4_07434938Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_a_Pp4_07813828RosBREED_snp_tart_cherry_a_Pp4_07813828Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_a_Pp4_07861540RosBREED_snp_tart_cherry_a_Pp4_07861540Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_f_Pp4_07862326RosBREED_snp_tart_cherry_f_Pp4_07862326Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_f_Pp4_08425845RosBREED_snp_tart_cherry_f_Pp4_08425845Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_a_Pp4_08495239RosBREED_snp_tart_cherry_a_Pp4_08495239Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_f_Pp4_08893154RosBREED_snp_tart_cherry_f_Pp4_08893154Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_a_Pp4_08955576RosBREED_snp_tart_cherry_a_Pp4_08955576Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_f_Pp4_09732651RosBREED_snp_tart_cherry_f_Pp4_09732651Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_f_Pp4_10832168RosBREED_snp_tart_cherry_f_Pp4_10832168Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_f_Pp4_11135825RosBREED_snp_tart_cherry_f_Pp4_11135825Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_a_Pp4_11651018RosBREED_snp_tart_cherry_a_Pp4_11651018Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_a_Pp4_11979679RosBREED_snp_tart_cherry_a_Pp4_11979679Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_f_Pp4_12520610RosBREED_snp_tart_cherry_f_Pp4_12520610Prunus cerasusgenetic_marker
RosBREED_snp_tart_cherry_a_Pp4_12532690RosBREED_snp_tart_cherry_a_Pp4_12532690Prunus cerasusgenetic_marker


The following haplotype feature(s) are a variant of this haplotype_block:

Feature NameUnique NameSpeciesType
aGR:4:7-13_aPrunus aviumhaplotype
bGR:4:7-13_bPrunus aviumhaplotype
cGR:4:7-13_cPrunus aviumhaplotype
dGR:4:7-13_dPrunus aviumhaplotype
eGR:4:7-13_ePrunus aviumhaplotype
fGR:4:7-13_fPrunus aviumhaplotype
gGR:4:7-13_gPrunus aviumhaplotype
hGR:4:7-13_hPrunus aviumhaplotype
iGR:4:7-13_iPrunus aviumhaplotype
jGR:4:7-13_jPrunus aviumhaplotype
kGR:4:7-13_kPrunus aviumhaplotype
lGR:4:7-13_lPrunus aviumhaplotype
mGR:4:7-13_mPrunus aviumhaplotype
nGR:4:7-13_nPrunus aviumhaplotype
oGR:4:7-13_oPrunus aviumhaplotype
pGR:4:7-13_pPrunus aviumhaplotype
qGR:4:7-13_qPrunus aviumhaplotype
rGR:4:7-13_rPrunus aviumhaplotype
sGR:4:7-13_sPrunus aviumhaplotype
x1GR:4:7-13_x1Prunus aviumhaplotype
x2GR:4:7-13_x2Prunus aviumhaplotype
x3GR:4:7-13_x3Prunus aviumhaplotype
x4GR:4:7-13_x4Prunus aviumhaplotype
x5GR:4:7-13_x5Prunus aviumhaplotype
x6GR:4:7-13_x6Prunus aviumhaplotype
x7GR:4:7-13_x7Prunus aviumhaplotype
x8GR:4:7-13_x8Prunus aviumhaplotype
d1GR:4:7-13_d1Prunus aviumhaplotype
d2GR:4:7-13_d2Prunus aviumhaplotype
d3GR:4:7-13_d3Prunus aviumhaplotype
d4GR:4:7-13_d4Prunus aviumhaplotype
1'GR:4:7-13_1'Prunus aviumhaplotype
4GR:4:7-13_4Prunus aviumhaplotype
6GR:4:7-13_6Prunus aviumhaplotype
13'GR:4:7-13_13'Prunus aviumhaplotype
13mGR:4:7-13_13mPrunus aviumhaplotype
14GR:4:7-13_14Prunus aviumhaplotype
16GR:4:7-13_16Prunus aviumhaplotype
34GR:4:7-13_34Prunus aviumhaplotype
35GR:4:7-13_35Prunus aviumhaplotype
36aGR:4:7-13_36aPrunus aviumhaplotype
36bGR:4:7-13_36bPrunus aviumhaplotype
36b2GR:4:7-13_36b2Prunus aviumhaplotype
aGR:4:7-13_aPrunus cerasushaplotype
bGR:4:7-13_bPrunus cerasushaplotype
cGR:4:7-13_cPrunus cerasushaplotype
dGR:4:7-13_dPrunus cerasushaplotype
eGR:4:7-13_ePrunus cerasushaplotype
fGR:4:7-13_fPrunus cerasushaplotype
gGR:4:7-13_gPrunus cerasushaplotype
hGR:4:7-13_hPrunus cerasushaplotype
iGR:4:7-13_iPrunus cerasushaplotype
jGR:4:7-13_jPrunus cerasushaplotype
kGR:4:7-13_kPrunus cerasushaplotype
lGR:4:7-13_lPrunus cerasushaplotype
mGR:4:7-13_mPrunus cerasushaplotype
nGR:4:7-13_nPrunus cerasushaplotype
oGR:4:7-13_oPrunus cerasushaplotype
pGR:4:7-13_pPrunus cerasushaplotype
qGR:4:7-13_qPrunus cerasushaplotype
rGR:4:7-13_rPrunus cerasushaplotype
sGR:4:7-13_sPrunus cerasushaplotype
x1GR:4:7-13_x1Prunus cerasushaplotype
x2GR:4:7-13_x2Prunus cerasushaplotype
x3GR:4:7-13_x3Prunus cerasushaplotype
x4GR:4:7-13_x4Prunus cerasushaplotype
x5GR:4:7-13_x5Prunus cerasushaplotype
x6GR:4:7-13_x6Prunus cerasushaplotype
x7GR:4:7-13_x7Prunus cerasushaplotype
x8GR:4:7-13_x8Prunus cerasushaplotype
d1GR:4:7-13_d1Prunus cerasushaplotype
d2GR:4:7-13_d2Prunus cerasushaplotype
d3GR:4:7-13_d3Prunus cerasushaplotype
d4GR:4:7-13_d4Prunus cerasushaplotype
1'GR:4:7-13_1'Prunus cerasushaplotype
4GR:4:7-13_4Prunus cerasushaplotype
6GR:4:7-13_6Prunus cerasushaplotype
13'GR:4:7-13_13'Prunus cerasushaplotype
13mGR:4:7-13_13mPrunus cerasushaplotype
14GR:4:7-13_14Prunus cerasushaplotype
16GR:4:7-13_16Prunus cerasushaplotype
34GR:4:7-13_34Prunus cerasushaplotype
35GR:4:7-13_35Prunus cerasushaplotype
36aGR:4:7-13_36aPrunus cerasushaplotype
36bGR:4:7-13_36bPrunus cerasushaplotype
36b2GR:4:7-13_36b2Prunus cerasushaplotype


Alignments
Feature NameTypeLocationAnalysis
Pp04 chromosome Pp04:7309252..12578471. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
Annotated Terms
The following terms have been associated with this haplotype_block:
Vocabulary: Rosaceae Trait Ontology
TermDefinition
MAIN:000192302bloom date
MAIN:000192293fruit firmness