MADS3, HQ229605.1-MADS3.m1 (mRNA) Prunus avium

Transcript Overview
NameMADS3
Unique NameHQ229605.1-MADS3.m1
TypemRNA
OrganismPrunus avium ()
Sourcegenbank
Producttranscription factor MADS3
Genbank NoteMADS-box protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HQ229605.1-MADS3.m1-cds1HQ229605.1-MADS3.m1-cds1Prunus aviumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MADS3HQ229605.1-MADS3.p1Prunus aviumpolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI345132118
nuccoreHQ229605.1
Alignments
Feature NameTypeLocationAnalysis
HQ229605 region HQ229605:63..785+ NCBI Rosaceae gene and mRNA sequences
scaffold_1 supercontig scaffold_1:22775642..22779896+ Prunus persica Whole Genome v1.0 Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>HQ229605.1-MADS3.m1 ID=HQ229605.1-MADS3.m1; Name=MADS3; organism=Prunus avium; type=mRNA; length=723bp
atggggagggggagagtggagctgaagaggattgagaacaagatcaacag
gcaggtgacctttgcgaagagaaggaacgggcttttgaagaaagcctacg
agctttccgttctttgcgaggctgaggttgctctcatcatcttctccaat
agaggaaagctgtacgagttttgcagtagctcaagcatgctcaaaactct
tgagaggtaccagaagtgcaactatggagcaccagagacaaatgtatctg
caagggaggccttggaattgagtagccagcaggagtatttgaagctcaag
gcacgttatgaagccctacaacgaaaccaaaggaatcttcttggagaaga
tcttggccctttaagcagcaaagagcttgaatcacttgaaaggcagctgg
atatgtcactgaagcagatcagatcgacacggacccaatacatgctggat
cagctcacagatcttcagcgaaaggagcacatgctaaatgaagcaaataa
gaccctgaaacaaaggttgtttgagggataccatgtaaattcactccaaa
tgaatccaaatgctgacgagtacggccggcaacaagctcaagctcacggc
gatggcttcttccatcccttagactgcgagccgacgttacagattggata
ccagaacgatccaatatcagtggtcacagcaggtccaagcgtgagtaatt
acatggcaggatggttgccatga
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protein sequence of MADS3

>HQ229605.1-MADS3.p1 ID=HQ229605.1-MADS3.p1; Name=MADS3; organism=Prunus avium; type=polypeptide; length=240bp
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCEAEVALIIFSN
RGKLYEFCSSSSMLKTLERYQKCNYGAPETNVSAREALELSSQQEYLKLK
ARYEALQRNQRNLLGEDLGPLSSKELESLERQLDMSLKQIRSTRTQYMLD
QLTDLQRKEHMLNEANKTLKQRLFEGYHVNSLQMNPNADEYGRQQAQAHG
DGFFHPLDCEPTLQIGYQNDPISVVTAGPSVSNYMAGWLP
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mRNA from alignment at HQ229605:63..785+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HQ229605.1-MADS3.m1 ID=HQ229605.1-MADS3.m1; Name=MADS3; organism=Prunus avium; type=mRNA; length=723bp; location=Sequence derived from: HQ229605:63..785+ (Prunus avium
atggggagggggagagtggagctgaagaggattgagaacaagatcaacag
gcaggtgacctttgcgaagagaaggaacgggcttttgaagaaagcctacg
agctttccgttctttgcgaggctgaggttgctctcatcatcttctccaat
agaggaaagctgtacgagttttgcagtagctcaagcatgctcaaaactct
tgagaggtaccagaagtgcaactatggagcaccagagacaaatgtatctg
caagggaggccttggaattgagtagccagcaggagtatttgaagctcaag
gcacgttatgaagccctacaacgaaaccaaaggaatcttcttggagaaga
tcttggccctttaagcagcaaagagcttgaatcacttgaaaggcagctgg
atatgtcactgaagcagatcagatcgacacggacccaatacatgctggat
cagctcacagatcttcagcgaaaggagcacatgctaaatgaagcaaataa
gaccctgaaacaaaggttgtttgagggataccatgtaaattcactccaaa
tgaatccaaatgctgacgagtacggccggcaacaagctcaagctcacggc
gatggcttcttccatcccttagactgcgagccgacgttacagattggata
ccagaacgatccaatatcagtggtcacagcaggtccaagcgtgagtaatt
acatggcaggatggttgccatga
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Coding sequence (CDS) from alignment at HQ229605:63..785+

>HQ229605.1-MADS3.m1 ID=HQ229605.1-MADS3.m1; Name=MADS3; organism=Prunus avium; type=CDS; length=723bp; location=Sequence derived from: HQ229605:63..785+ (Prunus avium
atggggagggggagagtggagctgaagaggattgagaacaagatcaacag
gcaggtgacctttgcgaagagaaggaacgggcttttgaagaaagcctacg
agctttccgttctttgcgaggctgaggttgctctcatcatcttctccaat
agaggaaagctgtacgagttttgcagtagctcaagcatgctcaaaactct
tgagaggtaccagaagtgcaactatggagcaccagagacaaatgtatctg
caagggaggccttggaattgagtagccagcaggagtatttgaagctcaag
gcacgttatgaagccctacaacgaaaccaaaggaatcttcttggagaaga
tcttggccctttaagcagcaaagagcttgaatcacttgaaaggcagctgg
atatgtcactgaagcagatcagatcgacacggacccaatacatgctggat
cagctcacagatcttcagcgaaaggagcacatgctaaatgaagcaaataa
gaccctgaaacaaaggttgtttgagggataccatgtaaattcactccaaa
tgaatccaaatgctgacgagtacggccggcaacaagctcaagctcacggc
gatggcttcttccatcccttagactgcgagccgacgttacagattggata
ccagaacgatccaatatcagtggtcacagcaggtccaagcgtgagtaatt
acatggcaggatggttgccatga
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